1 code implementation • 4 Nov 2020 • Matthew Aguirre, Jan Sokol, Guhan Venkataraman, Alexander Ioannidis
Local ancestry inference (LAI) identifies the ancestry of each segment of an individual's genome and is an important step in medical and population genetic studies of diverse cohorts.
1 code implementation • 25 Apr 2020 • Daniel Mas Montserrat, Arvind Kumar, Carlos Bustamante, Alexander Ioannidis
With declining sequencing costs a promising and affordable tool is emerging in cancer diagnostics: genomics.
Genomics Populations and Evolution
no code implementations • 22 Apr 2020 • Daniel Mas Montserrat, Carlos Bustamante, Alexander Ioannidis
Local-ancestry inference (LAI), also referred to as ancestry deconvolution, provides high-resolution ancestry estimation along the human genome.
1 code implementation • 27 Nov 2019 • Daniel Mas Montserrat, Carlos Bustamante, Alexander Ioannidis
Techniques to generate training samples that resemble real haploid sequences from ancestries of interest can be useful tools in such scenarios, since a generalized model can often be shared, but the unique human sample sequences cannot.