Search Results for author: Yi-Hsuan Lin

Found 7 papers, 1 papers with code

Enhancing Taiwanese Hokkien Dual Translation by Exploring and Standardizing of Four Writing Systems

1 code implementation18 Mar 2024 Bo-Han Lu, Yi-Hsuan Lin, En-Shiun Annie Lee, Richard Tzong-Han Tsai

The study aims to address this gap by developing a dual translation model between Taiwanese Hokkien and both Traditional Mandarin Chinese and English.

Machine Translation Translation

Electrostatics of Salt-Dependent Reentrant Phase Behaviors Highlights Diverse Roles of ATP in Biomolecular Condensates

no code implementations10 Jan 2024 Yi-Hsuan Lin, Tae Hun Kim, Suman Das, Tanmoy Pal, Jonas Wessén, Atul Kaushik Rangadurai, Lewis E. Kay, Julie D. Forman-Kay, Hue Sun Chan

Liquid-liquid phase separation (LLPS) involving intrinsically disordered protein regions (IDRs) is a major physical mechanism for biological membraneless compartmentalization.

Numerical Techniques for Applications of Analytical Theories to Sequence-Dependent Phase Separations of Intrinsically Disordered Proteins

no code implementations6 Jan 2022 Yi-Hsuan Lin, Jonas Wessén, Tanmoy Pal, Suman Das, Hue Sun Chan

Biomolecular condensates, physically underpinned to a significant extent by liquid-liquid phase separation (LLPS), are now widely recognized by numerous experimental studies to be of fundamental biological, biomedical, and biophysical importance.

Assembly of Model Postsynaptic Densities Involves Interactions Auxiliary to Stoichiometric Binding

no code implementations6 Oct 2021 Yi-Hsuan Lin, Haowei Wu, Bowen Jia, Mingjie Zhang, Hue Sun Chan

To understand the LLPS-driving domain-domain interactions, a fundamental question is how readily the interactions in the condensed phase can be inferred from inter-domain interactions in dilute solutions.

A Simple Explicit-Solvent Model of Polyampholyte Phase Behaviors and its Ramifications for Dielectric Effects in Biomolecular Condensates

no code implementations6 Feb 2021 Jonas Wessén, Tanmoy Pal, Suman Das, Yi-Hsuan Lin, Hue Sun Chan

Buttressed by theoretical treatments developed here using random phase approximation and polymer field-theoretic simulations, these observations indicate a partial compensation of effects between favorable solvent-mediated interactions among the polyampholytes in the condensed phase and favorable polyampholyte-solvent interactions in the dilute phase, often netting only a minor enhancement of overall LLPS propensity from the very dielectric heterogeneity that arises from the LLPS itself.

Dielectric Constant

Comparative Roles of Charge, $π$ and Hydrophobic Interactions in Sequence-Dependent Phase Separation of Intrinsically Disordered Proteins

no code implementations14 May 2020 Suman Das, Yi-Hsuan Lin, Robert M. Vernon, Julie D. Forman-Kay, Hue Sun Chan

Endeavoring toward a transferable, predictive coarse-grained explicit-chain model for biomolecular condensates underlain by liquid-liquid phase separation (LLPS), we conducted multiple-chain simulations of the N-terminal intrinsically disordered region (IDR) of DEAD-box helicase Ddx4, as a test case, to assess the roles of electrostatic, hydrophobic, cation-$\pi$, and aromatic interactions in amino acid sequence-dependent LLPS.

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