Search Results for author: Tim Leiner

Found 20 papers, 0 papers with code

From algorithms to action: improving patient care requires causality

no code implementations15 Sep 2022 Wouter A. C. van Amsterdam, Pim A. de Jong, Joost J. C. Verhoeff, Tim Leiner, Rajesh Ranganath

In cancer research there is much interest in building and validating outcome predicting outcomes to support treatment decisions.

Decision Making

AI-based Reconstruction for Fast MRI -- A Systematic Review and Meta-analysis

no code implementations23 Dec 2021 Yutong Chen, Carola-Bibiane Schönlieb, Pietro Liò, Tim Leiner, Pier Luigi Dragotti, Ge Wang, Daniel Rueckert, David Firmin, Guang Yang

Compressed sensing (CS) has been playing a key role in accelerating the magnetic resonance imaging (MRI) acquisition process.

Deep Learning-Based Regression and Classification for Automatic Landmark Localization in Medical Images

no code implementations10 Jul 2020 Julia M. H. Noothout, Bob D. de Vos, Jelmer M. Wolterink, Elbrich M. Postma, Paul A. M. Smeets, Richard A. P. Takx, Tim Leiner, Max A. Viergever, Ivana Išgum

Global landmark locations are obtained by averaging the predicted displacement vectors, where the contribution of each displacement vector is weighted by the posterior classification probability of the patch that it is pointing from.

Classification General Classification +1

Combined analysis of coronary arteries and the left ventricular myocardium in cardiac CT angiography for detection of patients with functionally significant stenosis

no code implementations10 Nov 2019 Majd Zreik, Tim Leiner, Nadieh Khalili, Robbert W. van Hamersvelt, Jelmer M. Wolterink, Michiel Voskuil, Max A. Viergever, Ivana Išgum

We combine our previous works for the analysis of the complete coronary artery tree and the LV myocardium: Coronary arteries are encoded by two disjoint convolutional autoencoders (CAEs) and the LV myocardium is characterized by a convolutional neural network (CNN) and a CAE.

Multiple Instance Learning

Graph Convolutional Networks for Coronary Artery Segmentation in Cardiac CT Angiography

no code implementations14 Aug 2019 Jelmer M. Wolterink, Tim Leiner, Ivana Išgum

In this work, we propose to use graph convolutional networks (GCNs) to predict the spatial location of vertices in a tubular surface mesh that segments the coronary artery lumen.

Coronary Artery Segmentation

Direct Automatic Coronary Calcium Scoring in Cardiac and Chest CT

no code implementations12 Feb 2019 Bob D. de Vos, Jelmer M. Wolterink, Tim Leiner, Pim A. de Jong, Nikolas Lessmann, Ivana Isgum

To meet demands of the increasing interest in quantification of CAC, i. e. coronary calcium scoring, especially as an unrequested finding for screening and research, automatic methods have been proposed.

Coronary Artery Centerline Extraction in Cardiac CT Angiography Using a CNN-Based Orientation Classifier

no code implementations7 Oct 2018 Jelmer M. Wolterink, Robbert W. van Hamersvelt, Max A. Viergever, Tim Leiner, Ivana Išgum

Evaluation using 24 test images of the CAT08 challenge showed that extracted centerlines had an average overlap of 93. 7% with 96 manually annotated reference centerlines.

Improving Myocardium Segmentation in Cardiac CT Angiography using Spectral Information

no code implementations27 Sep 2018 Steffen Bruns, Jelmer M. Wolterink, Robbert W. van Hamersvelt, Majd Zreik, Tim Leiner, Ivana Išgum

We propose augmentation of the training data with virtual mono-energetic reconstructions from a spectral CT scanner which show different attenuation levels of the contrast agent.

Data Augmentation Myocardium Segmentation +1

CNN-based Landmark Detection in Cardiac CTA Scans

no code implementations13 Apr 2018 Julia M. H. Noothout, Bob D. de Vos, Jelmer M. Wolterink, Tim Leiner, Ivana Išgum

Under the assumption that patches close to a landmark can determine the landmark location more precisely than patches farther from it, only those patches that contain the landmark according to classification are used to determine the landmark location.

Classification General Classification +1

Blood Vessel Geometry Synthesis using Generative Adversarial Networks

no code implementations12 Apr 2018 Jelmer M. Wolterink, Tim Leiner, Ivana Isgum

Results show that Wasserstein generative adversarial networks can be used to synthesize blood vessel geometries.

Anatomy Attribute +1

ConvNet-Based Localization of Anatomical Structures in 3D Medical Images

no code implementations19 Apr 2017 Bob D. de Vos, Jelmer M. Wolterink, Pim A. de Jong, Tim Leiner, Max A. Viergever, Ivana Išgum

We propose a method for automatic localization of one or more anatomical structures in 3D medical images through detection of their presence in 2D image slices using a convolutional neural network (ConvNet).

Dilated Convolutional Neural Networks for Cardiovascular MR Segmentation in Congenital Heart Disease

no code implementations12 Apr 2017 Jelmer M. Wolterink, Tim Leiner, Max A. Viergever, Ivana Išgum

Ten training and ten test CMR scans cropped to an ROI around the heart were provided in the MICCAI 2016 HVSMR challenge.

Segmentation

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