Search Results for author: Oliver M. Crook

Found 5 papers, 1 papers with code

Deep metric learning improves lab of origin prediction of genetically engineered plasmids

no code implementations24 Nov 2021 Igor M. Soares, Fernando H. F. Camargo, Adriano Marques, Oliver M. Crook

We also demonstrate that we can perform few-shot-learning and obtain $76\%$ top-10 accuracy using only $10\%$ of the sequences.

Few-Shot Learning Metric Learning

Analysis of the first Genetic Engineering Attribution Challenge

1 code implementation14 Oct 2021 Oliver M. Crook, Kelsey Lane Warmbrod, Greg Lipstein, Christine Chung, Christopher W. Bakerlee, T. Greg McKelvey Jr., Shelly R. Holland, Jacob L. Swett, Kevin M. Esvelt, Ethan C. Alley, William J. Bradshaw

The ability to identify the designer of engineered biological sequences -- termed genetic engineering attribution (GEA) -- would help ensure due credit for biotechnological innovation, while holding designers accountable to the communities they affect.

A Linear Transportation $\mathrm{L}^p$ Distance for Pattern Recognition

no code implementations23 Sep 2020 Oliver M. Crook, Mihai Cucuringu, Tim Hurst, Carola-Bibiane Schönlieb, Matthew Thorpe, Konstantinos C. Zygalakis

The transportation $\mathrm{L}^p$ distance, denoted $\mathrm{TL}^p$, has been proposed as a generalisation of Wasserstein $\mathrm{W}^p$ distances motivated by the property that it can be applied directly to colour or multi-channelled images, as well as multivariate time-series without normalisation or mass constraints.

Time Series Time Series Analysis

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