Search Results for author:
Found 3 papers, 2 papers with code
grenedalf: population genetic statistics for the next generation of pool sequencing
Pool sequencing is an efficient method for capturing genome-wide allele frequencies from multiple individuals, with broad applications such as studying adaptation in Evolve-and-Resequence experiments, monitoring of genetic diversity in wild populations, and genotype-to-phenotype mapping.
Metagenomic Analysis using Phylogenetic Placement -- A Review of the First Decade
Phylogenetic placement refers to a family of tools and methods to analyze, visualize, and interpret the tsunami of metagenomic sequencing data generated by high-throughput sequencing.
grenepipe: A flexible, scalable, and reproducible pipeline to automate variant and frequency calling from sequence reads
Processing high-throughput DNA sequencing data of individuals or populations requires stringing together independent software tools with many parameters, often leading to non-reproducible pipelines and datasets.
