Search Results for author: DongKi Kim

Found 4 papers, 3 papers with code

Protein Representation Learning by Capturing Protein Sequence-Structure-Function Relationship

no code implementations29 Apr 2024 Eunji Ko, Seul Lee, Minseon Kim, DongKi Kim

The goal of protein representation learning is to extract knowledge from protein databases that can be applied to various protein-related downstream tasks.

Representation Learning

Graph Generation with Diffusion Mixture

1 code implementation7 Feb 2023 Jaehyeong Jo, DongKi Kim, Sung Ju Hwang

Generation of graphs is a major challenge for real-world tasks that require understanding the complex nature of their non-Euclidean structures.

3D Molecule Generation Graph Generation +2

Graph Self-supervised Learning with Accurate Discrepancy Learning

1 code implementation7 Feb 2022 DongKi Kim, Jinheon Baek, Sung Ju Hwang

Contrastive learning, while it can learn global graph-level similarities, its objective to maximize the similarity between two differently perturbed graphs may result in representations that cannot discriminate two similar graphs with different properties.

Contrastive Learning Link Prediction +4

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