Search Results for author: Ahmet Sarıgün

Found 3 papers, 3 papers with code

Target Specific De Novo Design of Drug Candidate Molecules with Graph Transformer-based Generative Adversarial Networks

2 code implementations15 Feb 2023 Atabey Ünlü, Elif Çevrim, Ahmet Sarıgün, Hayriye Çelikbilek, Heval Ataş Güvenilir, Altay Koyaş, Deniz Cansen Kahraman, Abdurrahman Olğaç, Ahmet Rifaioğlu, Tunca Doğan

DrugGEN can be used to design completely novel and effective target-specific drug candidate molecules for any druggable protein, given target features and a dataset of experimental bioactivities.

Molecular Graph Generation

Graph Mixer Networks

1 code implementation29 Jan 2023 Ahmet Sarıgün

In recent years, the attention mechanism has demonstrated superior performance in various tasks, leading to the emergence of GAT and Graph Transformer models that utilize this mechanism to extract relational information from graph-structured data.

Computational Efficiency

Multi-Mask Aggregators for Graph Neural Networks

1 code implementation Learning on Graphs Conference 2022 Ahmet Sarıgün, Ahmet Sureyya Rifaioglu

One of the most critical operations in graph neural networks (GNNs) is the aggregation operation, which aims to extract information from neighbors of the target node.

Benchmarking Graph Regression +1

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