1 code implementation • ICLR Workshop DeepGenStruct 2019 • John Ingraham, Vikas Garg, Regina Barzilay, Tommi Jaakkola
Engineered proteins offer the potential to solve many problems in biomedicine, energy, and materials science, but creating designs that succeed is difficult in practice.
no code implementations • ICLR 2019 • John Ingraham, Adam Riesselman, Chris Sander, Debora Marks
This gap between the expressive capabilities and sampling practicalities of energy-based models is exemplified by the protein folding problem, since energy landscapes underlie contemporary knowledge of protein biophysics but computer simulations are often unable to fold all but the smallest proteins from first-principles.
no code implementations • ICML 2017 • John Ingraham, Debora Marks
Undirected graphical models are applied in genomics, protein structure prediction, and neuroscience to identify sparse interactions that underlie discrete data.