1 code implementation • 30 Aug 2023 • Jianning Li, Zongwei Zhou, Jiancheng Yang, Antonio Pepe, Christina Gsaxner, Gijs Luijten, Chongyu Qu, Tiezheng Zhang, Xiaoxi Chen, Wenxuan Li, Marek Wodzinski, Paul Friedrich, Kangxian Xie, Yuan Jin, Narmada Ambigapathy, Enrico Nasca, Naida Solak, Gian Marco Melito, Viet Duc Vu, Afaque R. Memon, Christopher Schlachta, Sandrine de Ribaupierre, Rajnikant Patel, Roy Eagleson, Xiaojun Chen, Heinrich Mächler, Jan Stefan Kirschke, Ezequiel de la Rosa, Patrick Ferdinand Christ, Hongwei Bran Li, David G. Ellis, Michele R. Aizenberg, Sergios Gatidis, Thomas Küstner, Nadya Shusharina, Nicholas Heller, Vincent Andrearczyk, Adrien Depeursinge, Mathieu Hatt, Anjany Sekuboyina, Maximilian Löffler, Hans Liebl, Reuben Dorent, Tom Vercauteren, Jonathan Shapey, Aaron Kujawa, Stefan Cornelissen, Patrick Langenhuizen, Achraf Ben-Hamadou, Ahmed Rekik, Sergi Pujades, Edmond Boyer, Federico Bolelli, Costantino Grana, Luca Lumetti, Hamidreza Salehi, Jun Ma, Yao Zhang, Ramtin Gharleghi, Susann Beier, Arcot Sowmya, Eduardo A. Garza-Villarreal, Thania Balducci, Diego Angeles-Valdez, Roberto Souza, Leticia Rittner, Richard Frayne, Yuanfeng Ji, Vincenzo Ferrari, Soumick Chatterjee, Florian Dubost, Stefanie Schreiber, Hendrik Mattern, Oliver Speck, Daniel Haehn, Christoph John, Andreas Nürnberger, João Pedrosa, Carlos Ferreira, Guilherme Aresta, António Cunha, Aurélio Campilho, Yannick Suter, Jose Garcia, Alain Lalande, Vicky Vandenbossche, Aline Van Oevelen, Kate Duquesne, Hamza Mekhzoum, Jef Vandemeulebroucke, Emmanuel Audenaert, Claudia Krebs, Timo Van Leeuwen, Evie Vereecke, Hauke Heidemeyer, Rainer Röhrig, Frank Hölzle, Vahid Badeli, Kathrin Krieger, Matthias Gunzer, Jianxu Chen, Timo van Meegdenburg, Amin Dada, Miriam Balzer, Jana Fragemann, Frederic Jonske, Moritz Rempe, Stanislav Malorodov, Fin H. Bahnsen, Constantin Seibold, Alexander Jaus, Zdravko Marinov, Paul F. Jaeger, Rainer Stiefelhagen, Ana Sofia Santos, Mariana Lindo, André Ferreira, Victor Alves, Michael Kamp, Amr Abourayya, Felix Nensa, Fabian Hörst, Alexander Brehmer, Lukas Heine, Yannik Hanusrichter, Martin Weßling, Marcel Dudda, Lars E. Podleska, Matthias A. Fink, Julius Keyl, Konstantinos Tserpes, Moon-Sung Kim, Shireen Elhabian, Hans Lamecker, Dženan Zukić, Beatriz Paniagua, Christian Wachinger, Martin Urschler, Luc Duong, Jakob Wasserthal, Peter F. Hoyer, Oliver Basu, Thomas Maal, Max J. H. Witjes, Gregor Schiele, Ti-chiun Chang, Seyed-Ahmad Ahmadi, Ping Luo, Bjoern Menze, Mauricio Reyes, Thomas M. Deserno, Christos Davatzikos, Behrus Puladi, Pascal Fua, Alan L. Yuille, Jens Kleesiek, Jan Egger
For the medical domain, we present a large collection of anatomical shapes (e. g., bones, organs, vessels) and 3D models of surgical instrument, called MedShapeNet, created to facilitate the translation of data-driven vision algorithms to medical applications and to adapt SOTA vision algorithms to medical problems.
1 code implementation • 11 Mar 2023 • Simon Graham, Quoc Dang Vu, Mostafa Jahanifar, Martin Weigert, Uwe Schmidt, Wenhua Zhang, Jun Zhang, Sen yang, Jinxi Xiang, Xiyue Wang, Josef Lorenz Rumberger, Elias Baumann, Peter Hirsch, Lihao Liu, Chenyang Hong, Angelica I. Aviles-Rivero, Ayushi Jain, Heeyoung Ahn, Yiyu Hong, Hussam Azzuni, Min Xu, Mohammad Yaqub, Marie-Claire Blache, Benoît Piégu, Bertrand Vernay, Tim Scherr, Moritz Böhland, Katharina Löffler, Jiachen Li, Weiqin Ying, Chixin Wang, Dagmar Kainmueller, Carola-Bibiane Schönlieb, Shuolin Liu, Dhairya Talsania, Yughender Meda, Prakash Mishra, Muhammad Ridzuan, Oliver Neumann, Marcel P. Schilling, Markus Reischl, Ralf Mikut, Banban Huang, Hsiang-Chin Chien, Ching-Ping Wang, Chia-Yen Lee, Hong-Kun Lin, Zaiyi Liu, Xipeng Pan, Chu Han, Jijun Cheng, Muhammad Dawood, Srijay Deshpande, Raja Muhammad Saad Bashir, Adam Shephard, Pedro Costa, João D. Nunes, Aurélio Campilho, Jaime S. Cardoso, Hrishikesh P S, Densen Puthussery, Devika R G, Jiji C V, Ye Zhang, Zijie Fang, Zhifan Lin, Yongbing Zhang, Chunhui Lin, Liukun Zhang, Lijian Mao, Min Wu, Vi Thi-Tuong Vo, Soo-Hyung Kim, Taebum Lee, Satoshi Kondo, Satoshi Kasai, Pranay Dumbhare, Vedant Phuse, Yash Dubey, Ankush Jamthikar, Trinh Thi Le Vuong, Jin Tae Kwak, Dorsa Ziaei, Hyun Jung, Tianyi Miao, David Snead, Shan E Ahmed Raza, Fayyaz Minhas, Nasir M. Rajpoot
Nuclear detection, segmentation and morphometric profiling are essential in helping us further understand the relationship between histology and patient outcome.
1 code implementation • 5 Oct 2022 • Elvin Johnson, Shreshta Mohan, Alex Gaudio, Asim Smailagic, Christos Faloutsos, Aurélio Campilho
HeartSpot priors are ante-hoc explainable and give a human-interpretable image of the preserved spatial features that clearly outlines the heart.
no code implementations • 1 Mar 2022 • Pedro Costa, Yongpan Fu, João Nunes, Aurélio Campilho, Jaime S. Cardoso
Cancer is one of the leading causes of death in the developed world.
1 code implementation • 28 Jul 2020 • Alex Gaudio, Asim Smailagic, Aurélio Campilho
We propose a pixel color amplification theory and family of enhancement methods to facilitate segmentation tasks on retinal images.
no code implementations • 27 Jul 2020 • Asim Smailagic, Anupma Sharan, Pedro Costa, Adrian Galdran, Alex Gaudio, Aurélio Campilho
Diabetic Retinopathy is the leading cause of blindness in the working-age population of the world.
no code implementations • 19 Nov 2019 • João Pedrosa, Guilherme Aresta, Carlos Ferreira, Márcio Rodrigues, Patrícia Leitão, André Silva Carvalho, João Rebelo, Eduardo Negrão, Isabel Ramos, António Cunha, Aurélio Campilho
Lung cancer is the deadliest type of cancer worldwide and late detection is the major factor for the low survival rate of patients.
no code implementations • 25 Oct 2019 • Teresa Araújo, Guilherme Aresta, Luís Mendonça, Susana Penas, Carolina Maia, Ângela Carneiro, Ana Maria Mendonça, Aurélio Campilho
We show that high QWK values occur for images with low prediction uncertainty, thus indicating that this uncertainty is a valid measure of the predictions' quality.
no code implementations • 9 Oct 2019 • Guilherme Aresta, Carlos Ferreira, João Pedrosa, Teresa Araújo, João Rebelo, Eduardo Negrão, Margarida Morgado, Filipe Alves, António Cunha, Isabel Ramos, Aurélio Campilho
Likewise, combining the findings of radiologist with the detection algorithm only for low fixation regions still significantly improves the detection sensitivity without increasing the number of false-positives.
1 code implementation • 28 Aug 2019 • Asim Smailagic, Pedro Costa, Alex Gaudio, Kartik Khandelwal, Mostafa Mirshekari, Jonathon Fagert, Devesh Walawalkar, Susu Xu, Adrian Galdran, Pei Zhang, Aurélio Campilho, Hae Young Noh
Our online method enhances performance of its underlying baseline deep network.
1 code implementation • 30 Nov 2018 • Guilherme Aresta, Colin Jacobs, Teresa Araújo, António Cunha, Isabel Ramos, Bram van Ginneken, Aurélio Campilho
We propose iW-Net, a deep learning model that allows for both automatic and interactive segmentation of lung nodules in computed tomography images.
no code implementations • 9 Oct 2018 • Teresa Araújo, Guilherme Aresta, Adrian Galdran, Pedro Costa, Ana Maria Mendonça, Aurélio Campilho
We propose UOLO, a novel framework for the simultaneous detection and segmentation of structures of interest in medical images.
no code implementations • 13 Aug 2018 • Guilherme Aresta, Teresa Araújo, Scotty Kwok, Sai Saketh Chennamsetty, Mohammed Safwan, Varghese Alex, Bahram Marami, Marcel Prastawa, Monica Chan, Michael Donovan, Gerardo Fernandez, Jack Zeineh, Matthias Kohl, Christoph Walz, Florian Ludwig, Stefan Braunewell, Maximilian Baust, Quoc Dang Vu, Minh Nguyen Nhat To, Eal Kim, Jin Tae Kwak, Sameh Galal, Veronica Sanchez-Freire, Nadia Brancati, Maria Frucci, Daniel Riccio, Yaqi Wang, Lingling Sun, Kaiqiang Ma, Jiannan Fang, Ismael Kone, Lahsen Boulmane, Aurélio Campilho, Catarina Eloy, António Polónia, Paulo Aguiar
From the submitted algorithms it was possible to push forward the state-of-the-art in terms of accuracy (87%) in automatic classification of breast cancer with histopathological images.
no code implementations • 10 Mar 2017 • Adrian Galdran, Aitor Alvarez-Gila, Maria Ines Meyer, Cristina L. Saratxaga, Teresa Araújo, Estibaliz Garrote, Guilherme Aresta, Pedro Costa, A. M. Mendonça, Aurélio Campilho
Specifically, we apply the \emph{shades of gray} color constancy technique to color-normalize the entire training set of images, while retaining the estimated illuminants.
1 code implementation • 31 Jan 2017 • Pedro Costa, Adrian Galdran, Maria Inês Meyer, Michael David Abràmoff, Meindert Niemeijer, Ana Maria Mendonça, Aurélio Campilho
These pairs are then used to learn a mapping from a binary vessel tree to a new retinal image.